Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav9n-2A0A0G2JDP3 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.12□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav9n-2A0A0G2JDP3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms