Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm43060-201ENSMUST00000200621 289 ntBASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm40848-201ENSMUST00000221998 324 ntBASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv12-1A0A0B4J1H0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.22■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv12-1A0A0B4J1H0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv12-1A0A0B4J1H0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms