Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trbv3A0A0A6YYE2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv3A0A0A6YYE2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Gm7143-201ENSMUST00000222811 859 ntBASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv3A0A0A6YYE2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv3A0A0A6YYE2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv3A0A0A6YYE2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv3A0A0A6YYE2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv3A0A0A6YYE2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.96□□□□□ -0.02
Trbv3A0A0A6YYE2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv3A0A0A6YYE2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trbv3A0A0A6YYE2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Gm7332-201ENSMUST00000118351 454 ntBASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Gm27502-201ENSMUST00000183495 199 ntBASIC14.94□□□□□ -0.02
Trbv3A0A0A6YYE2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms