Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.06■□□□□ 0.48
Ighv1-42A0A0A6YY38 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-42A0A0A6YY38 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-42A0A0A6YY38 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ighv1-42A0A0A6YY38 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm13146-201ENSMUST00000118508 780 ntBASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-42A0A0A6YY38 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.04■□□□□ 0.48
Ighv1-42A0A0A6YY38 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-42A0A0A6YY38 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm38205-201ENSMUST00000192243 258 ntBASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-42A0A0A6YY38 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-42A0A0A6YY38 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Ighv1-42A0A0A6YY38 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-42A0A0A6YY38 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ighv1-42A0A0A6YY38 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-42A0A0A6YY38 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.01■□□□□ 0.47
Ighv1-42A0A0A6YY38 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ighv1-42A0A0A6YY38 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.01■□□□□ 0.47
Ighv1-42A0A0A6YY38 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-42A0A0A6YY38 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18■□□□□ 0.47
Ighv1-42A0A0A6YY38 CT010467.1-202ENSMUST00000205406 714 ntBASIC18■□□□□ 0.47
Ighv1-42A0A0A6YY38 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ighv1-42A0A0A6YY38 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Ighv1-42A0A0A6YY38 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-42A0A0A6YY38 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-42A0A0A6YY38 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ighv1-42A0A0A6YY38 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-42A0A0A6YY38 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Notumos-201ENSMUST00000151998 2659 ntBASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ighv1-42A0A0A6YY38 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms