Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trbc1A0A0A6YWV4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbc1A0A0A6YWV4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbc1A0A0A6YWV4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbc1A0A0A6YWV4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbc1A0A0A6YWV4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbc1A0A0A6YWV4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms