Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-4A0A075B6B4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Gm12251-201ENSMUST00000117893 792 ntBASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Gm6139-201ENSMUST00000079261 882 ntBASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6-4A0A075B6B4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-4A0A075B6B4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-4A0A075B6B4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-4A0A075B6B4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-4A0A075B6B4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-4A0A075B6B4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-4A0A075B6B4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.94□□□□□ -0.02
Trav6-4A0A075B6B4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Gm43173-201ENSMUST00000202246 593 ntBASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-4A0A075B6B4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-4A0A075B6B4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms