Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-7A0A075B6A6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Serp2-204ENSMUST00000228055 705 ntBASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-7A0A075B6A6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6n-7A0A075B6A6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6n-7A0A075B6A6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm26833-201ENSMUST00000180899 440 ntBASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-7A0A075B6A6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm11421-201ENSMUST00000122124 294 ntBASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm40848-201ENSMUST00000221998 324 ntBASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6n-7A0A075B6A6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6n-7A0A075B6A6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6n-7A0A075B6A6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6n-7A0A075B6A6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6n-7A0A075B6A6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trav6n-7A0A075B6A6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav6n-7A0A075B6A6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-7A0A075B6A6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6n-7A0A075B6A6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms