Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-3A0A075B648 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-3A0A075B648 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-3A0A075B648 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-3A0A075B648 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-3A0A075B648 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-3A0A075B648 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-3A0A075B648 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-3A0A075B648 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-3A0A075B648 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-3A0A075B648 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Gm45364-201ENSMUST00000210883 159 ntBASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-3A0A075B648 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms