Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gm18284-201ENSMUST00000172604 624 ntBASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13-1A0A075B644 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13-1A0A075B644 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Gm8495-201ENSMUST00000188740 694 ntBASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13-1A0A075B644 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13-1A0A075B644 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13-1A0A075B644 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Smad6-203ENSMUST00000179458 273 ntBASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13-1A0A075B644 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Gm11421-201ENSMUST00000122124 294 ntBASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav13-1A0A075B644 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Gm5874-201ENSMUST00000096101 508 ntBASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13-1A0A075B644 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13-1A0A075B644 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms