Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav12n-2A0A075B626 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trav12n-2A0A075B626 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12n-2A0A075B626 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Gm15039-201ENSMUST00000118914 875 ntBASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12n-2A0A075B626 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12n-2A0A075B626 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trav12n-2A0A075B626 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav12n-2A0A075B626 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Gm27801-201ENSMUST00000184174 223 ntBASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12n-2A0A075B626 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Trav12n-2A0A075B626 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav12n-2A0A075B626 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav12n-2A0A075B626 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav12n-2A0A075B626 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12n-2A0A075B626 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12n-2A0A075B626 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12n-2A0A075B626 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.38
Trav12n-2A0A075B626 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12n-2A0A075B626 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12n-2A0A075B626 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.45■□□□□ 0.38
Trav12n-2A0A075B626 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12n-2A0A075B626 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12n-2A0A075B626 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12n-2A0A075B626 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12n-2A0A075B626 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12n-2A0A075B626 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms