Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Pld5-201ENSMUST00000065967 3557 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm37160-201ENSMUST00000193081 1689 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Supt7l-202ENSMUST00000200721 1657 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Ndufs1-201ENSMUST00000027111 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Rab27a-203ENSMUST00000184146 3168 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm11235-201ENSMUST00000117763 333 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
Hmgb3O54879 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Art2a-ps-201ENSMUST00000173420 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm27605-201ENSMUST00000184648 136 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm29199-201ENSMUST00000187766 775 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm18776-201ENSMUST00000188833 654 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm9884-201ENSMUST00000194343 1222 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm9463-201ENSMUST00000206707 601 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm9445-201ENSMUST00000207454 1285 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm18123-201ENSMUST00000210874 822 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm18122-201ENSMUST00000211390 904 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC7.93□□□□□ -1.14
Hmgb3O54879 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 AC158392.3-201ENSMUST00000224271 1284 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Itpripl1-202ENSMUST00000132773 3424 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Gm21026-201ENSMUST00000218628 1345 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Cenpu-201ENSMUST00000034045 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Rnmt-202ENSMUST00000025427 1852 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.93□□□□□ -1.14
Hmgb3O54879 BC026762-201ENSMUST00000206555 2503 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 AC154171.3-201ENSMUST00000224519 2505 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Sult5a1-201ENSMUST00000000755 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Btn2a2-202ENSMUST00000110432 2089 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Zswim3-201ENSMUST00000052107 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 A430078G23Rik-201ENSMUST00000098966 2945 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 4933412E24Rik-201ENSMUST00000096421 1748 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm45769-201ENSMUST00000204588 1828 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Pilra-201ENSMUST00000058897 2578 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Kcnj3-202ENSMUST00000112632 4068 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Acsl6-207ENSMUST00000101213 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Atp6v0e-202ENSMUST00000167352 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Sltm-201ENSMUST00000049263 3691 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Ola1-202ENSMUST00000100015 905 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm1826-201ENSMUST00000118646 1162 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm12168-201ENSMUST00000119051 368 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm14165-201ENSMUST00000121456 952 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm18159-201ENSMUST00000174516 1070 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Mir5120-201ENSMUST00000175020 78 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm26461-201ENSMUST00000175064 290 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm26134-201ENSMUST00000178484 110 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb3O54879 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm5186-201ENSMUST00000218781 920 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 AC154849.4-201ENSMUST00000224868 365 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Aftph-209ENSMUST00000177543 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gm28533-202ENSMUST00000190106 1346 ntTSL 5 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Hmgb3O54879 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 AC164437.1-201ENSMUST00000227321 2308 ntBASIC7.92□□□□□ -1.14
Hmgb3O54879 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmgb3O54879 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms