Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm11513-201ENSMUST00000138855 751 ntTSL 5 BASIC7.98□□□□□ -1.13
Hmgb3O54879 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm5274-201ENSMUST00000182641 1003 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm5542-201ENSMUST00000195485 1089 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm18056-201ENSMUST00000207670 568 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm18061-201ENSMUST00000208350 562 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm18063-201ENSMUST00000208529 568 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm18052-201ENSMUST00000208750 559 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm45758-201ENSMUST00000212448 1006 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 AC153363.1-201ENSMUST00000213572 359 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 AC166992.1-201ENSMUST00000216356 565 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm4811-201ENSMUST00000220879 1220 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm25973-201ENSMUST00000083717 127 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm42432-201ENSMUST00000197902 1617 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm11470-201ENSMUST00000118868 1475 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm28775-201ENSMUST00000186918 2167 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Spdl1-201ENSMUST00000093191 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Ica1l-205ENSMUST00000189776 1320 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmgb3O54879 Pde4b-205ENSMUST00000106904 2430 ntTSL 5 BASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm43684-201ENSMUST00000199279 6573 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Gm10302-201ENSMUST00000174433 3535 ntBASIC7.98□□□□□ -1.13
Hmgb3O54879 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Meis2-201ENSMUST00000028639 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Ppp1r12a-201ENSMUST00000070663 3403 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm10531-201ENSMUST00000193527 2303 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 AC160405.2-201ENSMUST00000219008 1987 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC7.97□□□□□ -1.13
Hmgb3O54879 AC140393.1-202ENSMUST00000228347 1818 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm9673-201ENSMUST00000119287 781 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm5555-201ENSMUST00000120352 1111 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm20426-201ENSMUST00000173657 440 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm18733-202ENSMUST00000174447 401 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm6498-201ENSMUST00000181413 1006 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm6773-201ENSMUST00000182377 878 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Ighv5-18-201ENSMUST00000193834 326 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm9771-201ENSMUST00000198267 1137 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC7.97□□□□□ -1.13
Hmgb3O54879 AC154680.1-201ENSMUST00000224376 859 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 AC134860.5-201ENSMUST00000225071 1249 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 AC164883.7-201ENSMUST00000228534 851 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 AC136376.2-201ENSMUST00000228819 490 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm7125-201ENSMUST00000093430 273 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Ces2a-204ENSMUST00000164182 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Phf19-201ENSMUST00000028232 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm45132-201ENSMUST00000207234 2542 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Mitf-207ENSMUST00000203884 2113 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm6727-201ENSMUST00000204102 1518 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms