Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn6Q9Z262 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.33■□□□□ 0.52
Cldn6Q9Z262 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
Cldn6Q9Z262 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cldn6Q9Z262 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn6Q9Z262 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn6Q9Z262 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn6Q9Z262 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn6Q9Z262 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cldn6Q9Z262 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn6Q9Z262 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn6Q9Z262 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn6Q9Z262 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn6Q9Z262 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn6Q9Z262 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn6Q9Z262 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Spcs1-204ENSMUST00000226782 949 ntBASIC18.26■□□□□ 0.51
Cldn6Q9Z262 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn6Q9Z262 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cldn6Q9Z262 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn6Q9Z262 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms