Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.95■□□□□ 0.46
ClcnkaQ9WUB7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ClcnkaQ9WUB7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Gm43137-201ENSMUST00000198052 594 ntBASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
ClcnkaQ9WUB7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClcnkaQ9WUB7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClcnkaQ9WUB7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClcnkaQ9WUB7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.89■□□□□ 0.46
ClcnkaQ9WUB7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClcnkaQ9WUB7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Gm12821-201ENSMUST00000120022 600 ntBASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClcnkaQ9WUB7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.87■□□□□ 0.45
ClcnkaQ9WUB7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms