Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nubp1Q9R060 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nubp1Q9R060 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Mir7071-201ENSMUST00000184847 69 ntBASIC17■□□□□ 0.31
Nubp1Q9R060 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17■□□□□ 0.31
Nubp1Q9R060 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17■□□□□ 0.31
Nubp1Q9R060 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nubp1Q9R060 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nubp1Q9R060 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nubp1Q9R060 Gm12527-201ENSMUST00000117967 564 ntBASIC16.99■□□□□ 0.31
Nubp1Q9R060 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Nubp1Q9R060 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nubp1Q9R060 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Gm7977-201ENSMUST00000193787 748 ntBASIC16.98■□□□□ 0.31
Nubp1Q9R060 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nubp1Q9R060 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nubp1Q9R060 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.97■□□□□ 0.31
Nubp1Q9R060 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nubp1Q9R060 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nubp1Q9R060 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nubp1Q9R060 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nubp1Q9R060 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nubp1Q9R060 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Gm13168-201ENSMUST00000121771 632 ntBASIC16.96■□□□□ 0.31
Nubp1Q9R060 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.96■□□□□ 0.31
Nubp1Q9R060 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nubp1Q9R060 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Nubp1Q9R060 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nubp1Q9R060 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nubp1Q9R060 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nubp1Q9R060 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Gm10812-201ENSMUST00000099864 546 ntBASIC16.95■□□□□ 0.3
Nubp1Q9R060 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.95■□□□□ 0.3
Nubp1Q9R060 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nubp1Q9R060 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.94■□□□□ 0.3
Nubp1Q9R060 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Nubp1Q9R060 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Mir6236-201ENSMUST00000184437 123 ntBASIC16.94■□□□□ 0.3
Nubp1Q9R060 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.94■□□□□ 0.3
Nubp1Q9R060 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nubp1Q9R060 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms