Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps29Q9QZ88 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps29Q9QZ88 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.7■□□□□ 0.58
Vps29Q9QZ88 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps29Q9QZ88 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vps29Q9QZ88 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.7■□□□□ 0.58
Vps29Q9QZ88 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps29Q9QZ88 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps29Q9QZ88 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Vps29Q9QZ88 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps29Q9QZ88 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Vps29Q9QZ88 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Vps29Q9QZ88 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps29Q9QZ88 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps29Q9QZ88 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps29Q9QZ88 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps29Q9QZ88 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps29Q9QZ88 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps29Q9QZ88 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps29Q9QZ88 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps29Q9QZ88 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Iqck-206ENSMUST00000208658 2891 ntBASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps29Q9QZ88 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps29Q9QZ88 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps29Q9QZ88 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps29Q9QZ88 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps29Q9QZ88 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Vps29Q9QZ88 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms