Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Gm9847-201ENSMUST00000052528 599 ntBASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clca3a1Q9QX15 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Clca3a1Q9QX15 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.34■□□□□ 0.53
Clca3a1Q9QX15 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clca3a1Q9QX15 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clca3a1Q9QX15 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clca3a1Q9QX15 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.33■□□□□ 0.53
Clca3a1Q9QX15 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clca3a1Q9QX15 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clca3a1Q9QX15 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clca3a1Q9QX15 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.33■□□□□ 0.52
Clca3a1Q9QX15 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clca3a1Q9QX15 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clca3a1Q9QX15 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clca3a1Q9QX15 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clca3a1Q9QX15 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Gm13241-201ENSMUST00000094493 780 ntBASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clca3a1Q9QX15 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms