Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prg4Q9JM99 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
Prg4Q9JM99 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prg4Q9JM99 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prg4Q9JM99 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prg4Q9JM99 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prg4Q9JM99 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prg4Q9JM99 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Prg4Q9JM99 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prg4Q9JM99 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.83■□□□□ 0.44
Prg4Q9JM99 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.83■□□□□ 0.44
Prg4Q9JM99 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prg4Q9JM99 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.83■□□□□ 0.44
Prg4Q9JM99 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Prg4Q9JM99 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Prg4Q9JM99 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.82■□□□□ 0.44
Prg4Q9JM99 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prg4Q9JM99 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.81■□□□□ 0.44
Prg4Q9JM99 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prg4Q9JM99 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Gm10849-201ENSMUST00000100397 618 ntBASIC17.8■□□□□ 0.44
Prg4Q9JM99 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prg4Q9JM99 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prg4Q9JM99 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Gm42642-201ENSMUST00000200683 355 ntBASIC17.78■□□□□ 0.44
Prg4Q9JM99 Gm10033-202ENSMUST00000211874 928 ntBASIC17.78■□□□□ 0.44
Prg4Q9JM99 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.78■□□□□ 0.44
Prg4Q9JM99 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prg4Q9JM99 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prg4Q9JM99 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prg4Q9JM99 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prg4Q9JM99 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prg4Q9JM99 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Prg4Q9JM99 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prg4Q9JM99 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prg4Q9JM99 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prg4Q9JM99 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Prg4Q9JM99 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prg4Q9JM99 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Prg4Q9JM99 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms