Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a2Q9JLR1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a2Q9JLR1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sec61a2Q9JLR1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.52■□□□□ 0.4
Sec61a2Q9JLR1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec61a2Q9JLR1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec61a2Q9JLR1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec61a2Q9JLR1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec61a2Q9JLR1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Sec61a2Q9JLR1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec61a2Q9JLR1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec61a2Q9JLR1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec61a2Q9JLR1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a2Q9JLR1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a2Q9JLR1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a2Q9JLR1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sec61a2Q9JLR1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sec61a2Q9JLR1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms