Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zc3h8Q9JJ48 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zc3h8Q9JJ48 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Zc3h8Q9JJ48 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Zc3h8Q9JJ48 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Zc3h8Q9JJ48 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Zc3h8Q9JJ48 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 AA386476-201ENSMUST00000098781 1665 ntBASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Gm8495-201ENSMUST00000188740 694 ntBASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zc3h8Q9JJ48 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Zc3h8Q9JJ48 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3h8Q9JJ48 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zc3h8Q9JJ48 Gm27801-201ENSMUST00000184174 223 ntBASIC18.11■□□□□ 0.49
Zc3h8Q9JJ48 Gm5874-201ENSMUST00000096101 508 ntBASIC18.11■□□□□ 0.49
Zc3h8Q9JJ48 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Zc3h8Q9JJ48 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Gm10493-201ENSMUST00000097270 612 ntBASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.1■□□□□ 0.49
Zc3h8Q9JJ48 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Zc3h8Q9JJ48 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Zc3h8Q9JJ48 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Zc3h8Q9JJ48 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.08■□□□□ 0.49
Zc3h8Q9JJ48 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.08■□□□□ 0.48
Zc3h8Q9JJ48 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zc3h8Q9JJ48 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zc3h8Q9JJ48 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zc3h8Q9JJ48 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 189.1 ms