Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp2aQ9DB34 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp2aQ9DB34 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp2aQ9DB34 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Chmp2aQ9DB34 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp2aQ9DB34 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp2aQ9DB34 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.34■□□□□ 0.85
Chmp2aQ9DB34 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.34■□□□□ 0.85
Chmp2aQ9DB34 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp2aQ9DB34 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp2aQ9DB34 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Gm15039-201ENSMUST00000118914 875 ntBASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp2aQ9DB34 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Chmp2aQ9DB34 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp2aQ9DB34 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp2aQ9DB34 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Serp2-204ENSMUST00000228055 705 ntBASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp2aQ9DB34 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp2aQ9DB34 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp2aQ9DB34 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Gm40848-201ENSMUST00000221998 324 ntBASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Chmp2aQ9DB34 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2aQ9DB34 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Chmp2aQ9DB34 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2aQ9DB34 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2aQ9DB34 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2aQ9DB34 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2aQ9DB34 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp2aQ9DB34 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms