Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tmem54Q9D7S1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmem54Q9D7S1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmem54Q9D7S1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tmem54Q9D7S1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Gm26833-201ENSMUST00000180899 440 ntBASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmem54Q9D7S1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmem54Q9D7S1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmem54Q9D7S1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Gm11421-201ENSMUST00000122124 294 ntBASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmem54Q9D7S1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tmem54Q9D7S1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Gm40848-201ENSMUST00000221998 324 ntBASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmem54Q9D7S1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmem54Q9D7S1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem54Q9D7S1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem54Q9D7S1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem54Q9D7S1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmem54Q9D7S1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.08■□□□□ 0.32
Tmem54Q9D7S1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem54Q9D7S1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.08■□□□□ 0.32
Tmem54Q9D7S1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem54Q9D7S1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tmem54Q9D7S1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Gm43060-201ENSMUST00000200621 289 ntBASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tmem54Q9D7S1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms