Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.17■□□□□ 0.66
5530400C23RikQ9D3I0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
5530400C23RikQ9D3I0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
5530400C23RikQ9D3I0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
5530400C23RikQ9D3I0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
5530400C23RikQ9D3I0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
5530400C23RikQ9D3I0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
5530400C23RikQ9D3I0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
5530400C23RikQ9D3I0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Mir7075-201ENSMUST00000184187 82 ntBASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Spcs1-204ENSMUST00000226782 949 ntBASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.15■□□□□ 0.66
5530400C23RikQ9D3I0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
5530400C23RikQ9D3I0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
5530400C23RikQ9D3I0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Notumos-201ENSMUST00000151998 2659 ntBASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Gm12251-201ENSMUST00000117893 792 ntBASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Gm45417-201ENSMUST00000209533 758 ntBASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
5530400C23RikQ9D3I0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
5530400C23RikQ9D3I0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 AA386476-201ENSMUST00000098781 1665 ntBASIC19.11■□□□□ 0.65
5530400C23RikQ9D3I0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
5530400C23RikQ9D3I0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms