Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx47Q9CWX9 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.08■□□□□ 0.8
Ddx47Q9CWX9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx47Q9CWX9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx47Q9CWX9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ddx47Q9CWX9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 BC021767-201ENSMUST00000126387 1716 ntBASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx47Q9CWX9 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx47Q9CWX9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.04■□□□□ 0.8
Ddx47Q9CWX9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx47Q9CWX9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx47Q9CWX9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx47Q9CWX9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms