Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc43Q9CR29 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc43Q9CR29 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc43Q9CR29 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc43Q9CR29 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Golgb1-201ENSMUST00000023534 498 ntBASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.65■■□□□ 1.06
Ccdc43Q9CR29 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc43Q9CR29 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc43Q9CR29 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc43Q9CR29 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc43Q9CR29 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Gm12922-201ENSMUST00000120626 809 ntBASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc43Q9CR29 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc43Q9CR29 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.6■■□□□ 1.05
Ccdc43Q9CR29 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc43Q9CR29 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms