Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Gm9988-201ENSMUST00000069786 435 ntBASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm7Q9CQQ8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm7Q9CQQ8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm7Q9CQQ8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Gm42569-201ENSMUST00000200539 472 ntBASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm7Q9CQQ8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm7Q9CQQ8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.74■□□□□ 0.75
Lsm7Q9CQQ8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 AA386476-201ENSMUST00000098781 1665 ntBASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm7Q9CQQ8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm7Q9CQQ8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm7Q9CQQ8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.7■□□□□ 0.74
Lsm7Q9CQQ8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm7Q9CQQ8 Gm26571-201ENSMUST00000181399 666 ntBASIC19.69■□□□□ 0.74
Lsm7Q9CQQ8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lsm7Q9CQQ8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm7Q9CQQ8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm7Q9CQQ8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
Lsm7Q9CQQ8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm7Q9CQQ8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms