Protein–RNA interactions for Protein: Q9CQC2

Clps, Colipase, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpsQ9CQC2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClpsQ9CQC2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.25■□□□□ 0.67
ClpsQ9CQC2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpsQ9CQC2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.23■□□□□ 0.67
ClpsQ9CQC2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClpsQ9CQC2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ClpsQ9CQC2 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.23■□□□□ 0.67
ClpsQ9CQC2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.23■□□□□ 0.67
ClpsQ9CQC2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClpsQ9CQC2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ClpsQ9CQC2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.22■□□□□ 0.67
ClpsQ9CQC2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
ClpsQ9CQC2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
ClpsQ9CQC2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpsQ9CQC2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ClpsQ9CQC2 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.2■□□□□ 0.66
ClpsQ9CQC2 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.2■□□□□ 0.66
ClpsQ9CQC2 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.2■□□□□ 0.66
ClpsQ9CQC2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.2■□□□□ 0.66
ClpsQ9CQC2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.2■□□□□ 0.66
ClpsQ9CQC2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpsQ9CQC2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ClpsQ9CQC2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ClpsQ9CQC2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpsQ9CQC2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpsQ9CQC2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ClpsQ9CQC2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpsQ9CQC2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.17■□□□□ 0.66
ClpsQ9CQC2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpsQ9CQC2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ClpsQ9CQC2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.17■□□□□ 0.66
ClpsQ9CQC2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.16■□□□□ 0.66
ClpsQ9CQC2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClpsQ9CQC2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClpsQ9CQC2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClpsQ9CQC2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ClpsQ9CQC2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClpsQ9CQC2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ClpsQ9CQC2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ClpsQ9CQC2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClpsQ9CQC2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ClpsQ9CQC2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.14■□□□□ 0.65
ClpsQ9CQC2 Gm26571-201ENSMUST00000181399 666 ntBASIC19.14■□□□□ 0.65
ClpsQ9CQC2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClpsQ9CQC2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ClpsQ9CQC2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ClpsQ9CQC2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms