Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh23Q99PF4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh23Q99PF4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh23Q99PF4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh23Q99PF4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh23Q99PF4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh23Q99PF4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh23Q99PF4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cdh23Q99PF4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh23Q99PF4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh23Q99PF4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh23Q99PF4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh23Q99PF4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.27■□□□□ 0.84
Cdh23Q99PF4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cdh23Q99PF4 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.27■□□□□ 0.83
Cdh23Q99PF4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Gm5643-201ENSMUST00000117081 966 ntBASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh23Q99PF4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Gm6576-201ENSMUST00000169678 883 ntBASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh23Q99PF4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh23Q99PF4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Gm11643-201ENSMUST00000119578 864 ntBASIC20.23■□□□□ 0.83
Cdh23Q99PF4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cdh23Q99PF4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh23Q99PF4 Gm13534-201ENSMUST00000121169 513 ntBASIC20.21■□□□□ 0.83
Cdh23Q99PF4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh23Q99PF4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms