Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Tlr3Q99MB1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr3Q99MB1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Tlr3Q99MB1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Mir7075-201ENSMUST00000184187 82 ntBASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Tlr3Q99MB1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Gm12251-201ENSMUST00000117893 792 ntBASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.94■□□□□ 0.94
Tlr3Q99MB1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr3Q99MB1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr3Q99MB1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr3Q99MB1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.91■□□□□ 0.94
Tlr3Q99MB1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms