Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf3Q99LI7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf3Q99LI7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf3Q99LI7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cstf3Q99LI7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf3Q99LI7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Gm12922-201ENSMUST00000120626 809 ntBASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Golgb1-201ENSMUST00000023534 498 ntBASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cstf3Q99LI7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cstf3Q99LI7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cstf3Q99LI7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cstf3Q99LI7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
Cstf3Q99LI7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.83■□□□□ 0.6
Cstf3Q99LI7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cstf3Q99LI7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Golph3-202ENSMUST00000226517 2359 ntBASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cstf3Q99LI7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cstf3Q99LI7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.8■□□□□ 0.6
Cstf3Q99LI7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cstf3Q99LI7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf3Q99LI7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf3Q99LI7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf3Q99LI7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cstf3Q99LI7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cstf3Q99LI7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.78■□□□□ 0.6
Cstf3Q99LI7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms