Protein–RNA interactions for Protein: Q99JH7

Clstn3, Calsyntenin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3Q99JH7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clstn3Q99JH7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Gm13148-201ENSMUST00000118892 745 ntBASIC20.96■□□□□ 0.95
Clstn3Q99JH7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 AA386476-201ENSMUST00000098781 1665 ntBASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clstn3Q99JH7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Nespas-201ENSMUST00000143738 1083 ntBASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Clstn3Q99JH7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clstn3Q99JH7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Gm13534-201ENSMUST00000121169 513 ntBASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Gm6420-201ENSMUST00000193885 723 ntBASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Gm6365-201ENSMUST00000054711 744 ntBASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.93■□□□□ 0.94
Clstn3Q99JH7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clstn3Q99JH7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clstn3Q99JH7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clstn3Q99JH7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Gm7290-201ENSMUST00000104990 617 ntBASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Gm12918-201ENSMUST00000120234 636 ntBASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Gm15710-201ENSMUST00000121821 636 ntBASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Gm5075-201ENSMUST00000196916 622 ntBASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clstn3Q99JH7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Gm12527-201ENSMUST00000117967 564 ntBASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.9■□□□□ 0.94
Clstn3Q99JH7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Clstn3Q99JH7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clstn3Q99JH7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.89■□□□□ 0.93
Clstn3Q99JH7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clstn3Q99JH7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clstn3Q99JH7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clstn3Q99JH7 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.89■□□□□ 0.93
Clstn3Q99JH7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clstn3Q99JH7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clstn3Q99JH7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms