Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rfc4Q99J62 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.59■■□□□ 1.21
Rfc4Q99J62 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rfc4Q99J62 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
Rfc4Q99J62 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Rfc4Q99J62 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.58■■□□□ 1.21
Rfc4Q99J62 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.58■■□□□ 1.21
Rfc4Q99J62 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rfc4Q99J62 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rfc4Q99J62 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Rfc4Q99J62 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc4Q99J62 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.57■■□□□ 1.2
Rfc4Q99J62 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.57■■□□□ 1.2
Rfc4Q99J62 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc4Q99J62 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rfc4Q99J62 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rfc4Q99J62 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rfc4Q99J62 Gm20760-201ENSMUST00000179197 648 ntBASIC22.56■■□□□ 1.2
Rfc4Q99J62 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rfc4Q99J62 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rfc4Q99J62 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rfc4Q99J62 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rfc4Q99J62 Gm13146-201ENSMUST00000118508 780 ntBASIC22.55■■□□□ 1.2
Rfc4Q99J62 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rfc4Q99J62 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Gm22240-201ENSMUST00000175225 82 ntBASIC22.54■■□□□ 1.2
Rfc4Q99J62 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc4Q99J62 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc4Q99J62 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc4Q99J62 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Gm7290-201ENSMUST00000104990 617 ntBASIC22.52■■□□□ 1.2
Rfc4Q99J62 Gm12918-201ENSMUST00000120234 636 ntBASIC22.52■■□□□ 1.2
Rfc4Q99J62 Gm15710-201ENSMUST00000121821 636 ntBASIC22.52■■□□□ 1.2
Rfc4Q99J62 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Gm5075-201ENSMUST00000196916 622 ntBASIC22.52■■□□□ 1.2
Rfc4Q99J62 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.52■■□□□ 1.2
Rfc4Q99J62 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.52■■□□□ 1.2
Rfc4Q99J62 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc4Q99J62 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Rfc4Q99J62 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfc4Q99J62 Gm6365-201ENSMUST00000054711 744 ntBASIC22.51■■□□□ 1.19
Rfc4Q99J62 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfc4Q99J62 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfc4Q99J62 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfc4Q99J62 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc4Q99J62 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc4Q99J62 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc4Q99J62 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Rfc4Q99J62 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.5■■□□□ 1.19
Rfc4Q99J62 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc4Q99J62 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc4Q99J62 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.5■■□□□ 1.19
Rfc4Q99J62 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Gm12527-201ENSMUST00000117967 564 ntBASIC22.49■■□□□ 1.19
Rfc4Q99J62 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Gm5408-201ENSMUST00000197998 747 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms