Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha2Q91Y17 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha2Q91Y17 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha2Q91Y17 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha2Q91Y17 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha2Q91Y17 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pcdha2Q91Y17 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha2Q91Y17 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdha2Q91Y17 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha2Q91Y17 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha2Q91Y17 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha2Q91Y17 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdha2Q91Y17 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdha2Q91Y17 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.89■□□□□ 0.93
Pcdha2Q91Y17 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Gm27801-201ENSMUST00000184174 223 ntBASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha2Q91Y17 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha2Q91Y17 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha2Q91Y17 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha2Q91Y17 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdha2Q91Y17 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha2Q91Y17 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha2Q91Y17 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha2Q91Y17 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Pcdha2Q91Y17 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha2Q91Y17 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha2Q91Y17 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha2Q91Y17 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha2Q91Y17 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha2Q91Y17 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha2Q91Y17 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.84■□□□□ 0.93
Pcdha2Q91Y17 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdha2Q91Y17 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms