Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.85■□□□□ 0.93
Pcdha9Q91Y11 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha9Q91Y11 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha9Q91Y11 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 Gm11421-201ENSMUST00000122124 294 ntBASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha9Q91Y11 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha9Q91Y11 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Pcdha9Q91Y11 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha9Q91Y11 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Gm26833-201ENSMUST00000180899 440 ntBASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.82■□□□□ 0.92
Pcdha9Q91Y11 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha9Q91Y11 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha9Q91Y11 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha9Q91Y11 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcdha9Q91Y11 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdha9Q91Y11 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha9Q91Y11 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha9Q91Y11 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha9Q91Y11 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha9Q91Y11 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha9Q91Y11 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha9Q91Y11 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdha9Q91Y11 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha9Q91Y11 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms