Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhac2Q91Y09 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhac2Q91Y09 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Gm6420-201ENSMUST00000193885 723 ntBASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Gm4968-201ENSMUST00000071458 858 ntBASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhac2Q91Y09 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Nespas-201ENSMUST00000143738 1083 ntBASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhac2Q91Y09 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac2Q91Y09 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Pcdhac2Q91Y09 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.33■■□□□ 1.01
Pcdhac2Q91Y09 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac2Q91Y09 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac2Q91Y09 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac2Q91Y09 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.33■■□□□ 1.01
Pcdhac2Q91Y09 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhac2Q91Y09 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Gm12527-201ENSMUST00000117967 564 ntBASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac2Q91Y09 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac2Q91Y09 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac2Q91Y09 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac2Q91Y09 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhac2Q91Y09 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhac2Q91Y09 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhac2Q91Y09 Gm6365-201ENSMUST00000054711 744 ntBASIC21.28■■□□□ 1
Pcdhac2Q91Y09 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhac2Q91Y09 AA386476-201ENSMUST00000098781 1665 ntBASIC21.28■■□□□ 1
Pcdhac2Q91Y09 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhac2Q91Y09 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhac2Q91Y09 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhac2Q91Y09 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhac2Q91Y09 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhac2Q91Y09 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Pcdhac2Q91Y09 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms