Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 AA386476-201ENSMUST00000098781 1665 ntBASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Pcdhb5Q91XZ5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb5Q91XZ5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb5Q91XZ5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb5Q91XZ5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.14■■□□□ 1.29
Pcdhb5Q91XZ5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb5Q91XZ5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.14■■□□□ 1.29
Pcdhb5Q91XZ5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.14■■□□□ 1.29
Pcdhb5Q91XZ5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb5Q91XZ5 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.13■■□□□ 1.29
Pcdhb5Q91XZ5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Pcdhb5Q91XZ5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Gm13146-201ENSMUST00000118508 780 ntBASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb5Q91XZ5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb5Q91XZ5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb5Q91XZ5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb5Q91XZ5 Gm38205-201ENSMUST00000192243 258 ntBASIC23.11■■□□□ 1.29
Pcdhb5Q91XZ5 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.11■■□□□ 1.29
Pcdhb5Q91XZ5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb5Q91XZ5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Mir5133-201ENSMUST00000174955 77 ntBASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb5Q91XZ5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb5Q91XZ5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.08■■□□□ 1.29
Pcdhb5Q91XZ5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb5Q91XZ5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhb5Q91XZ5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms