Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Gm43017-201ENSMUST00000198296 752 ntBASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Gm43173-201ENSMUST00000202246 593 ntBASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga4Q91XY4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga4Q91XY4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga4Q91XY4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga4Q91XY4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga4Q91XY4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga4Q91XY4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga4Q91XY4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Gm12251-201ENSMUST00000117893 792 ntBASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga4Q91XY4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga4Q91XY4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga4Q91XY4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Gm26833-201ENSMUST00000180899 440 ntBASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga4Q91XY4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms