Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Gm9847-201ENSMUST00000052528 599 ntBASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb4Q91XX6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhgb4Q91XX6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb4Q91XX6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb4Q91XX6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Pcdhgb4Q91XX6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb4Q91XX6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Pcdhgb4Q91XX6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 AA386476-201ENSMUST00000098781 1665 ntBASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb4Q91XX6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhgb4Q91XX6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb4Q91XX6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb4Q91XX6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.62■□□□□ 0.89
Pcdhgb4Q91XX6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb4Q91XX6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb4Q91XX6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhgb4Q91XX6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb4Q91XX6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb4Q91XX6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Gm21956-201ENSMUST00000179946 522 ntBASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb4Q91XX6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb4Q91XX6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb4Q91XX6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb4Q91XX6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb4Q91XX6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb4Q91XX6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb4Q91XX6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb4Q91XX6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms