Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx9Q91VH2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.56■□□□□ 0.88
Snx9Q91VH2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Snx9Q91VH2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx9Q91VH2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.54■□□□□ 0.88
Snx9Q91VH2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Snx9Q91VH2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.54■□□□□ 0.88
Snx9Q91VH2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx9Q91VH2 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.54■□□□□ 0.88
Snx9Q91VH2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.54■□□□□ 0.88
Snx9Q91VH2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx9Q91VH2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.54■□□□□ 0.88
Snx9Q91VH2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx9Q91VH2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Gm18284-201ENSMUST00000172604 624 ntBASIC20.53■□□□□ 0.88
Snx9Q91VH2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.53■□□□□ 0.88
Snx9Q91VH2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx9Q91VH2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx9Q91VH2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx9Q91VH2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx9Q91VH2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Snx9Q91VH2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.52■□□□□ 0.88
Snx9Q91VH2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx9Q91VH2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx9Q91VH2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Snx9Q91VH2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Snx9Q91VH2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx9Q91VH2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.51■□□□□ 0.87
Snx9Q91VH2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Snx9Q91VH2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Snx9Q91VH2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx9Q91VH2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx9Q91VH2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx9Q91VH2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.48■□□□□ 0.87
Snx9Q91VH2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Snx9Q91VH2 Gm8495-201ENSMUST00000188740 694 ntBASIC20.48■□□□□ 0.87
Snx9Q91VH2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx9Q91VH2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx9Q91VH2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms