Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vsx1Q91V10 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Vsx1Q91V10 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vsx1Q91V10 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Gm27801-201ENSMUST00000184174 223 ntBASIC19.36■□□□□ 0.69
Vsx1Q91V10 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx1Q91V10 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Gm13148-201ENSMUST00000118892 745 ntBASIC19.35■□□□□ 0.69
Vsx1Q91V10 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.35■□□□□ 0.69
Vsx1Q91V10 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.35■□□□□ 0.69
Vsx1Q91V10 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx1Q91V10 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx1Q91V10 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.34■□□□□ 0.69
Vsx1Q91V10 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vsx1Q91V10 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vsx1Q91V10 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Vsx1Q91V10 Gm13168-201ENSMUST00000121771 632 ntBASIC19.33■□□□□ 0.68
Vsx1Q91V10 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx1Q91V10 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx1Q91V10 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx1Q91V10 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx1Q91V10 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx1Q91V10 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.32■□□□□ 0.68
Vsx1Q91V10 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx1Q91V10 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.31■□□□□ 0.68
Vsx1Q91V10 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vsx1Q91V10 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vsx1Q91V10 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vsx1Q91V10 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vsx1Q91V10 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vsx1Q91V10 Gm5408-201ENSMUST00000197998 747 ntBASIC19.29■□□□□ 0.68
Vsx1Q91V10 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vsx1Q91V10 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.29■□□□□ 0.68
Vsx1Q91V10 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vsx1Q91V10 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vsx1Q91V10 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vsx1Q91V10 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.28■□□□□ 0.68
Vsx1Q91V10 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vsx1Q91V10 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vsx1Q91V10 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vsx1Q91V10 Gm7977-201ENSMUST00000193787 748 ntBASIC19.28■□□□□ 0.68
Vsx1Q91V10 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.28■□□□□ 0.68
Vsx1Q91V10 Gm20049-201ENSMUST00000219950 730 ntBASIC19.28■□□□□ 0.68
Vsx1Q91V10 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vsx1Q91V10 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vsx1Q91V10 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vsx1Q91V10 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Vsx1Q91V10 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Vsx1Q91V10 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms