Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H1fooQ8VIK3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H1fooQ8VIK3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H1fooQ8VIK3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H1fooQ8VIK3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
H1fooQ8VIK3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H1fooQ8VIK3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
H1fooQ8VIK3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
H1fooQ8VIK3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
H1fooQ8VIK3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
H1fooQ8VIK3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H1fooQ8VIK3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.3■□□□□ 0.2
H1fooQ8VIK3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.3■□□□□ 0.2
H1fooQ8VIK3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Iqck-206ENSMUST00000208658 2891 ntBASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.29■□□□□ 0.2
H1fooQ8VIK3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H1fooQ8VIK3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.27■□□□□ 0.2
H1fooQ8VIK3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Gm9847-201ENSMUST00000052528 599 ntBASIC16.27■□□□□ 0.2
H1fooQ8VIK3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H1fooQ8VIK3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.27■□□□□ 0.19
H1fooQ8VIK3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H1fooQ8VIK3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
H1fooQ8VIK3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
H1fooQ8VIK3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
H1fooQ8VIK3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms