Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpa1Q8VEE4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.59■□□□□ 0.73
Rpa1Q8VEE4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rpa1Q8VEE4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa1Q8VEE4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa1Q8VEE4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa1Q8VEE4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpa1Q8VEE4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Rpa1Q8VEE4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpa1Q8VEE4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rpa1Q8VEE4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.58■□□□□ 0.73
Rpa1Q8VEE4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpa1Q8VEE4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rpa1Q8VEE4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpa1Q8VEE4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.58■□□□□ 0.72
Rpa1Q8VEE4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpa1Q8VEE4 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpa1Q8VEE4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpa1Q8VEE4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rpa1Q8VEE4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpa1Q8VEE4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpa1Q8VEE4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rpa1Q8VEE4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms