Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.28■□□□□ 0.68
Slc6a20aQ8VDB9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20aQ8VDB9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20aQ8VDB9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.28■□□□□ 0.68
Slc6a20aQ8VDB9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20aQ8VDB9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20aQ8VDB9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20aQ8VDB9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20aQ8VDB9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20aQ8VDB9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20aQ8VDB9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20aQ8VDB9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20aQ8VDB9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20aQ8VDB9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc6a20aQ8VDB9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.67
Slc6a20aQ8VDB9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc6a20aQ8VDB9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc6a20aQ8VDB9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.26■□□□□ 0.67
Slc6a20aQ8VDB9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a20aQ8VDB9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a20aQ8VDB9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20aQ8VDB9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20aQ8VDB9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc6a20aQ8VDB9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20aQ8VDB9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20aQ8VDB9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20aQ8VDB9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a20aQ8VDB9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20aQ8VDB9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Slc6a20aQ8VDB9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20aQ8VDB9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20aQ8VDB9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20aQ8VDB9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20aQ8VDB9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a20aQ8VDB9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.21■□□□□ 0.67
Slc6a20aQ8VDB9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20aQ8VDB9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20aQ8VDB9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20aQ8VDB9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Slc6a20aQ8VDB9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc6a20aQ8VDB9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20aQ8VDB9 Gm21956-201ENSMUST00000179946 522 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms