Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.54■□□□□ 0.72
Vps39Q8R5L3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps39Q8R5L3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps39Q8R5L3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps39Q8R5L3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps39Q8R5L3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps39Q8R5L3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Vps39Q8R5L3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps39Q8R5L3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps39Q8R5L3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps39Q8R5L3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps39Q8R5L3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps39Q8R5L3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Vps39Q8R5L3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps39Q8R5L3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps39Q8R5L3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps39Q8R5L3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Vps39Q8R5L3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Vps39Q8R5L3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Golgb1-201ENSMUST00000023534 498 ntBASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vps39Q8R5L3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps39Q8R5L3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps39Q8R5L3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps39Q8R5L3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps39Q8R5L3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms