Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdt1Q8R4E9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Cdt1Q8R4E9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Cdt1Q8R4E9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdt1Q8R4E9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdt1Q8R4E9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdt1Q8R4E9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdt1Q8R4E9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdt1Q8R4E9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdt1Q8R4E9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdt1Q8R4E9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Gm27011-201ENSMUST00000182352 972 ntBASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdt1Q8R4E9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.84■□□□□ 0.61
Cdt1Q8R4E9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms