Protein–RNA interactions for Protein: Q8R3G9

Tspan8, Tetraspanin-8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan8Q8R3G9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tspan8Q8R3G9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tspan8Q8R3G9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tspan8Q8R3G9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tspan8Q8R3G9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan8Q8R3G9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan8Q8R3G9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan8Q8R3G9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan8Q8R3G9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tspan8Q8R3G9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Tspan8Q8R3G9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tspan8Q8R3G9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tspan8Q8R3G9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Reep4-203ENSMUST00000226563 1444 ntBASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tspan8Q8R3G9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Gm13234-201ENSMUST00000120010 747 ntBASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tspan8Q8R3G9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Gm9988-201ENSMUST00000069786 435 ntBASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tspan8Q8R3G9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan8Q8R3G9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan8Q8R3G9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.2■□□□□ 0.98
Tspan8Q8R3G9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan8Q8R3G9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan8Q8R3G9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan8Q8R3G9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tspan8Q8R3G9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 AV356131-201ENSMUST00000206201 750 ntBASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Tspan8Q8R3G9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Tspan8Q8R3G9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms