Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Gm13146-201ENSMUST00000118508 780 ntBASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Gm38205-201ENSMUST00000192243 258 ntBASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 AA386476-201ENSMUST00000098781 1665 ntBASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.12■■□□□ 1.61
Chmp7Q8R1T1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 AC154266.1-201ENSMUST00000223190 503 ntBASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Chmp7Q8R1T1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 CT010467.1-202ENSMUST00000205406 714 ntBASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chmp7Q8R1T1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Chmp7Q8R1T1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Chmp7Q8R1T1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC25.09■■□□□ 1.61
Chmp7Q8R1T1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Chmp7Q8R1T1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Chmp7Q8R1T1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Chmp7Q8R1T1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Chmp7Q8R1T1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Chmp7Q8R1T1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Chmp7Q8R1T1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Chmp7Q8R1T1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Chmp7Q8R1T1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Chmp7Q8R1T1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Gm12441-201ENSMUST00000121806 588 ntBASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chmp7Q8R1T1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms