Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp40Q8R1F9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rpp40Q8R1F9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.02■□□□□ 0.96
Rpp40Q8R1F9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rpp40Q8R1F9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Rpp40Q8R1F9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Gm18284-201ENSMUST00000172604 624 ntBASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp40Q8R1F9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp40Q8R1F9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Rpp40Q8R1F9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rpp40Q8R1F9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp40Q8R1F9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp40Q8R1F9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rpp40Q8R1F9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp40Q8R1F9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Gm27801-201ENSMUST00000184174 223 ntBASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp40Q8R1F9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rpp40Q8R1F9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp40Q8R1F9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rpp40Q8R1F9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rpp40Q8R1F9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp40Q8R1F9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.95■□□□□ 0.94
Rpp40Q8R1F9 Gm5874-201ENSMUST00000096101 508 ntBASIC20.95■□□□□ 0.94
Rpp40Q8R1F9 Gm10493-201ENSMUST00000097270 612 ntBASIC20.95■□□□□ 0.94
Rpp40Q8R1F9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp40Q8R1F9 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.95■□□□□ 0.94
Rpp40Q8R1F9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp40Q8R1F9 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.94■□□□□ 0.94
Rpp40Q8R1F9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.94■□□□□ 0.94
Rpp40Q8R1F9 Gm8495-201ENSMUST00000188740 694 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms