Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Treml1Q8K558 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Treml1Q8K558 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.28■□□□□ 0.68
Treml1Q8K558 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.28■□□□□ 0.68
Treml1Q8K558 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.28■□□□□ 0.68
Treml1Q8K558 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Treml1Q8K558 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Treml1Q8K558 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Treml1Q8K558 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Treml1Q8K558 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Treml1Q8K558 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Treml1Q8K558 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Treml1Q8K558 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Treml1Q8K558 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Treml1Q8K558 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Treml1Q8K558 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Treml1Q8K558 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Treml1Q8K558 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Treml1Q8K558 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Treml1Q8K558 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Treml1Q8K558 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Treml1Q8K558 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.27■□□□□ 0.68
Treml1Q8K558 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Treml1Q8K558 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Treml1Q8K558 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.27■□□□□ 0.68
Treml1Q8K558 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.27■□□□□ 0.68
Treml1Q8K558 Gm40848-201ENSMUST00000221998 324 ntBASIC19.27■□□□□ 0.68
Treml1Q8K558 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Treml1Q8K558 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.27■□□□□ 0.67
Treml1Q8K558 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Treml1Q8K558 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Treml1Q8K558 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Treml1Q8K558 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Treml1Q8K558 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Treml1Q8K558 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Treml1Q8K558 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.26■□□□□ 0.67
Treml1Q8K558 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Treml1Q8K558 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Treml1Q8K558 Golph3-202ENSMUST00000226517 2359 ntBASIC19.26■□□□□ 0.67
Treml1Q8K558 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Treml1Q8K558 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Treml1Q8K558 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Treml1Q8K558 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Treml1Q8K558 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Treml1Q8K558 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Treml1Q8K558 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.25■□□□□ 0.67
Treml1Q8K558 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Treml1Q8K558 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Treml1Q8K558 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Treml1Q8K558 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.24■□□□□ 0.67
Treml1Q8K558 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.24■□□□□ 0.67
Treml1Q8K558 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Treml1Q8K558 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.24■□□□□ 0.67
Treml1Q8K558 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Treml1Q8K558 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Treml1Q8K558 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Treml1Q8K558 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Treml1Q8K558 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Treml1Q8K558 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Treml1Q8K558 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Treml1Q8K558 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Treml1Q8K558 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Treml1Q8K558 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Treml1Q8K558 Smad6-203ENSMUST00000179458 273 ntBASIC19.22■□□□□ 0.67
Treml1Q8K558 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Treml1Q8K558 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Treml1Q8K558 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Treml1Q8K558 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Treml1Q8K558 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Treml1Q8K558 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Treml1Q8K558 AA386476-201ENSMUST00000098781 1665 ntBASIC19.21■□□□□ 0.67
Treml1Q8K558 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Treml1Q8K558 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Treml1Q8K558 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms