Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Serp2-204ENSMUST00000228055 705 ntBASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sf3a1Q8K4Z5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sf3a1Q8K4Z5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sf3a1Q8K4Z5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sf3a1Q8K4Z5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Sf3a1Q8K4Z5 AA386476-201ENSMUST00000098781 1665 ntBASIC23.89■■□□□ 1.42
Sf3a1Q8K4Z5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Sf3a1Q8K4Z5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Sf3a1Q8K4Z5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sf3a1Q8K4Z5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Sf3a1Q8K4Z5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Gm26833-201ENSMUST00000180899 440 ntBASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Sf3a1Q8K4Z5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sf3a1Q8K4Z5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.86■■□□□ 1.41
Sf3a1Q8K4Z5 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.86■■□□□ 1.41
Sf3a1Q8K4Z5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
Sf3a1Q8K4Z5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Sf3a1Q8K4Z5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.86■■□□□ 1.41
Sf3a1Q8K4Z5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
Sf3a1Q8K4Z5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.84■■□□□ 1.41
Sf3a1Q8K4Z5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms